ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bxkA2 - ECOD Domain | ECOD

ECOD/Domains/e6bxkA2

e6bxkA2

UID: 002320087

PDB

Range: A:2-96
PDB: 6BXK chain A(all domains)
UniProt: O58832 (all domains)
Gene: dph2

Molecule: 2-(3-amino-3-carboxypropyl)histidine synthase

3D Structure

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Related Domains

Browse other domains in Diphthamide_syn →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupIron-sulphur enzyme Dph2(2007.1.16)

FFamilyDiphthamide_syn(2007.1.16.1)

Ligands

in contact, ≤ 4 Å

5'-S-methyl-5'-thioadenosineMTA
drugDrugBank DB02282
Iron/sulfur clusterSF4

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

PF01866Diphthamide_syn

Putative diphthamide synthesis protein

External Links

ECOD PDB View: 6BXK RCSB PDB: 6BXK PDBe: 6BXK UniProt: O58832

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.