ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bxnB1 - ECOD Domain | ECOD

ECOD/Domains/e6bxnB1

e6bxnB1

UID: 002320104

PDB

Range: B:7-94
PDB: 6BXN chain B(all domains)
UniProt: A0A062UZ78 (all domains)
Gene: ANME2D_01646

Molecule: Diphthamide biosynthesis enzyme Dph2

3D Structure

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Related Domains

Browse other domains in Diphthamide_syn →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupIron-sulphur enzyme Dph2(2007.1.16)

FFamilyDiphthamide_syn(2007.1.16.1)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01866Diphthamide_syn

Putative diphthamide synthesis protein

External Links

ECOD PDB View: 6BXN RCSB PDB: 6BXN PDBe: 6BXN UniProt: A0A062UZ78

Downloads

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