ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bxoB3 - ECOD Domain | ECOD

ECOD/Domains/e6bxoB3

e6bxoB3

UID: 002320109

PDB

Range: B:3-94
PDB: 6BXO chain B(all domains)
UniProt: A0A062UZ78 (all domains)
Gene: ANME2D_01646

Molecule: Diphthamide biosynthesis enzyme Dph2

3D Structure

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Related Domains

Browse other domains in Diphthamide_syn →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupIron-sulphur enzyme Dph2(2007.1.16)

FFamilyDiphthamide_syn(2007.1.16.1)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01866Diphthamide_syn

Putative diphthamide synthesis protein

External Links

ECOD PDB View: 6BXO RCSB PDB: 6BXO PDBe: 6BXO UniProt: A0A062UZ78

Downloads

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