ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6c4mC2 - ECOD Domain | ECOD

ECOD/Domains/e6c4mC2

e6c4mC2

UID: 002320111

PDB

Range: C:1-156,C:181-226
PDB: 6C4M chain C(all domains)
UniProt: Q8CKU7 (all domains)
Gene: y2835

Molecule: Yersinopine dehydrogenase

3D Structure

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Related Domains

Browse other domains in Staph_opine_DH →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyStaph_opine_DH(2003.1.1.64)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10100Staph_opine_DH

Staphylopine dehydrogenase

External Links

ECOD PDB View: 6C4M RCSB PDB: 6C4M PDBe: 6C4M UniProt: Q8CKU7

Downloads

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