ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6auiC2 - ECOD Domain | ECOD

ECOD/Domains/e6auiC2

e6auiC2

UID: 002320587

PDB

Range: C:215-743
PDB: 6AUI chain C(all domains)
UniProt: P23921 (all domains)
Gene: RRM1

Molecule: Ribonucleoside-diphosphate reductase large subunit

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_lgC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyRibonuc_red_lgC(2500.1.1.2)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-DiphosphateCDP
drugDrugBank DB04555
dATPDTP
drugDrugBank DB03222
Magnesium ion

Pfam Families

PF02867Ribonuc_red_lgC

Ribonucleotide reductase, barrel domain

ClanCL0339PFL-like

External Links

ECOD PDB View: 6AUI RCSB PDB: 6AUI PDBe: 6AUI UniProt: P23921

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.