ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5oqj62 - ECOD Domain | ECOD

ECOD/Domains/e5oqj62

e5oqj62

UID: 002320838

PDB

Range: 6:375-457
PDB: 5OQJ chain 6(all domains)
UniProt: Q04673 (all domains)
Gene: SSL1

Molecule: Suppressor of stem-loop protein 1

3D Structure

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Related Domains

Browse other domains in C1_4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupCysteine-rich domain(376.1.2)

FFamilyC1_4(376.1.2.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

TFIIH C1-like domain

ClanCL0229RING

External Links

ECOD PDB View: 5OQJ RCSB PDB: 5OQJ PDBe: 5OQJ UniProt: Q04673

Downloads

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