ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wdtz2 - ECOD Domain | ECOD

ECOD/Domains/e5wdtz2

e5wdtz2

UID: 002320928

PDB

Range: z:1-202
PDB: 5WDT chain z(all domains)
UniProt: P0CE48 (all domains)
Gene: tufB

Molecule: Elongation factor Tu 2

3D Structure

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Related Domains

Browse other domains in GTP_EFTU →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGTP_EFTU(2004.1.1.14)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid guanylate esterGNP
drugDrugBank DB02082
PhenylalaninePHE
drugDrugBank DB00120

Pfam Families

PF00009GTP_EFTU

Elongation factor Tu GTP binding domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5WDT RCSB PDB: 5WDT PDBe: 5WDT UniProt: P0CE48

Downloads

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Magnesium ion

metal

Shown in the structure viewer. Drug annotations from DrugDomain.