ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5v1qA1 - ECOD Domain | ECOD

ECOD/Domains/e5v1qA1

e5v1qA1

UID: 002322642

PDB

Range: A:2-439
PDB: 5V1Q chain A(all domains)
UniProt: A0A0Z8EWX1 (all domains)
Gene: ERS132389_00250

Molecule: Radical SAM

3D Structure

Loading viewer...

Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Ligands

in contact, ≤ 4 Å

Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5V1Q RCSB PDB: 5V1Q PDBe: 5V1Q UniProt: A0A0Z8EWX1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure