ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xfpA2 - ECOD Domain | ECOD

ECOD/Domains/e5xfpA2

e5xfpA2

UID: 002322668

PDB

Range: A:29-86
PDB: 5XFP chain A(all domains)
UniProt: O43189 (all domains)
Gene: PHF1

Molecule: PHD finger protein 1

3D Structure

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Related Domains

Browse other domains in Tudor_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyTudor_2(4.1.1.101)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18104Tudor_2

Jumonji domain-containing protein 2A Tudor domain

ClanCL0010SH3

External Links

ECOD PDB View: 5XFP RCSB PDB: 5XFP PDBe: 5XFP UniProt: O43189

Downloads

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