ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tyqA2 - ECOD Domain | ECOD

ECOD/Domains/e5tyqA2

e5tyqA2

UID: 002322805

PDB

Range: A:80-307
PDB: 5TYQ chain A(all domains)
UniProt: Q2MG72 (all domains)
Gene: genN

Molecule: Putative gentamicin methyltransferase

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMTS(2003.1.5.46)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Methyltransferase small domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5TYQ RCSB PDB: 5TYQ PDBe: 5TYQ UniProt: Q2MG72

Downloads

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