ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bwyB1 - ECOD Domain | ECOD

ECOD/Domains/e6bwyB1

e6bwyB1

UID: 002323038

PDB

Range: B:30-194
PDB: 6BWY chain B(all domains)
UniProt: Q9HC16 (all domains)
Gene: APOBEC3G

Molecule: Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusion

3D Structure

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Related Domains

Browse other domains in POT1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyPOT1(2.1.1.23)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Telomeric single stranded DNA binding POT1/CDC13

ClanCL0021OB

External Links

ECOD PDB View: 6BWY RCSB PDB: 6BWY PDBe: 6BWY UniProt: Q9HC16

Downloads

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