ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6eo5A2 - ECOD Domain | ECOD

ECOD/Domains/e6eo5A2

e6eo5A2

UID: 002323178

PDB

Range: A:249-504
PDB: 6EO5 chain A(all domains)
UniProt: A0A2K1JP57 (all domains)
Gene: LOC112289746

Molecule: PpBBE-like 1 D396N

3D Structure

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Related Domains

Browse other domains in BBE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 6EO5 RCSB PDB: 6EO5 PDBe: 6EO5 UniProt: A0A2K1JP57

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.