ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1a5iA1 - ECOD Domain | ECOD

ECOD/Domains/e1a5iA1

e1a5iA1

UID: 000023234

PDB

Range: A:4-243
PDB: 1A5I chain A(all domains)
UniProt: P98119 (all domains)

Molecule: PLASMINOGEN ACTIVATOR

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

L-alpha-glutamyl-N-{(1S)-4-{[amino(iminio)methyl]amino}-1-[(1S)-2-chloro-1-hydroxyethyl]butyl}glycinamide0GJ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 1A5I RCSB PDB: 1A5I PDBe: 1A5I UniProt: P98119

Downloads

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