ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z68B1 - ECOD Domain | ECOD

ECOD/Domains/e5z68B1

e5z68B1

UID: 002323508

PDB

Range: B:-2-365
PDB: 5Z68 chain B(all domains)
UniProt: Q8RDL3 (all domains)
Gene: recF

Molecule: DNA replication and repair protein RecF

3D Structure

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Related Domains

Browse other domains in SMC_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySMC_N(2004.1.1.87)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

+ 1 additive (Imidazole)

Pfam Families

RecF/RecN/SMC N terminal domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5Z68 RCSB PDB: 5Z68 PDBe: 5Z68 UniProt: Q8RDL3

Downloads

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Imidazole

DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.