ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4apxA2 - ECOD Domain | ECOD

ECOD/Domains/e4apxA2

e4apxA2

UID: 000232368

PDB

Range: A:2-103
PDB: 4APX chain A(all domains)
UniProt: Q99PF4 (all domains)
Gene: Cdh23

Molecule: CADHERIN-23

3D Structure

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Related Domains

Browse other domains in Cadherin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin(11.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Glycerin, 2-(N-morpholino)ethanesulfonic acid)

GlycerinGOL
DrugBank DB09462
2-(N-morpholino)ethanesulfonic acidMES

Pfam Families

PF00028Cadherin

Cadherin domain

ClanCL0159E-set

External Links

ECOD PDB View: 4APX RCSB PDB: 4APX PDBe: 4APX UniProt: Q99PF4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.