ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1uwvA3 - ECOD Domain | ECOD

ECOD/Domains/e1uwvA3

e1uwvA3

UID: 002323715

RepresentativePDB

Range: A:126-245
PDB: 1UWV chain A(all domains)
UniProt: P55135 (all domains)
Gene: rlmD

Molecule: 23S RRNA (URACIL-5-)-METHYLTRANSFERASE RUMA

3D Structure

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Related Domains

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Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Chloride ionCL
NICKEL (II) IONNI
metal
Iron/sulfur clusterSF4

External Links

ECOD PDB View: 1UWV RCSB PDB: 1UWV PDBe: 1UWV UniProt: P55135

Downloads

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+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.