ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5opjA4 - ECOD Domain | ECOD

ECOD/Domains/e5opjA4

e5opjA4

UID: 002323919

RepresentativePDB

Range: A:671-804
PDB: 5OPJ chain A(all domains)
UniProt: Q8AAW3 (all domains)
Gene: BT_0349

Molecule: Rhamnogalacturonan lyase

3D Structure

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Related Domains

Browse other domains in DUF6805 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyDUF6805(10.32.1.66)

Ligands

in contact, ≤ 4 Å

Alpha-L-ArabinoseAHR
drugDrugBank DB03142

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20620DUF6805

Family of unknown function (DUF6805)

ClanCL0202GBD

External Links

ECOD PDB View: 5OPJ RCSB PDB: 5OPJ PDBe: 5OPJ UniProt: Q8AAW3

Downloads

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