ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5oqdC2 - ECOD Domain | ECOD

ECOD/Domains/e5oqdC2

e5oqdC2

UID: 002323924

RepresentativePDB

Range: C:574-693
PDB: 5OQD chain C(all domains)
UniProt: Q24459 (all domains)
Gene: Pcl

Molecule: Polycomb protein Pcl

3D Structure

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Related Domains

Browse other domains in PCL_mid →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyPCL_mid(101.1.2.500)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF30898PCL_mid

Polycomb-like middle domain

External Links

ECOD PDB View: 5OQD RCSB PDB: 5OQD PDBe: 5OQD UniProt: Q24459

Downloads

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