ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v1qB2 - ECOD Domain | ECOD

ECOD/Domains/e5v1qB2

e5v1qB2

UID: 002323965

RepresentativePDB

Range: B:102-439
PDB: 5V1Q chain B(all domains)
UniProt: A0A0Z8EWX1 (all domains)
Gene: ERS132389_00250

Molecule: Radical SAM

3D Structure

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Related Domains

Browse other domains in Radical_SAM,SPASM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM,SPASM(2002.1.1.125)

Ligands

in contact, ≤ 4 Å

Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

Iron-sulfur cluster-binding domain

External Links

ECOD PDB View: 5V1Q RCSB PDB: 5V1Q PDBe: 5V1Q UniProt: A0A0Z8EWX1

Downloads

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