ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5x9dA1 - ECOD Domain | ECOD

ECOD/Domains/e5x9dA1

e5x9dA1

UID: 002325043

PDB

Range: A:134-304
PDB: 5X9D chain A(all domains)
UniProt: F9VNG5 (all domains)
Gene: hom

Molecule: Homoserine dehydrogenase

3D Structure

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Related Domains

Browse other domains in Homoserine_dh →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyHomoserine_dh(298.1.1.2)

Ligands

in contact, ≤ 4 Å

L-tartaric acidTLA
drugDrugBank DB09459within 5 Å only
(2R)-3-[[(4S)-3-aminocarbonyl-1-[(2R,3R,4S,5R)-5-[[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]-4H-pyridin-4-yl]sulfanyl]-2-azanyl-propanoic acid80F

Pfam Families

PF00742Homoserine_dh

Homoserine dehydrogenase

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 5X9D RCSB PDB: 5X9D PDBe: 5X9D UniProt: F9VNG5

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.