ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ok4A2 - ECOD Domain | ECOD

ECOD/Domains/e5ok4A2

e5ok4A2

UID: 002325544

PDB

Range: A:245-344
PDB: 5OK4 chain A(all domains)
UniProt: P32440 (all domains)
Gene: hmd

Molecule: 5,10-methenyltetrahydromethanopterin hydrogenase

3D Structure

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Related Domains

Browse other domains in HMD →

Classification

AArchitecturealpha arrays(a.6)

XX-group6-phosphogluconate dehydrogenase C-terminal domain-like(129)

HH-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1)

TT-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1.1)

FFamilyHMD(129.1.1.8)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase

ClanCL01066PGD_C

External Links

ECOD PDB View: 5OK4 RCSB PDB: 5OK4 PDBe: 5OK4 UniProt: P32440

Downloads

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