ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1buiB1 - ECOD Domain | ECOD

ECOD/Domains/e1buiB1

e1buiB1

UID: 000023262

PDB

Range: B:16-241
PDB: 1BUI chain B(all domains)
UniProt: P00747 (all domains)
Gene: PLG

Molecule: Plasminogen

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

L-alpha-glutamyl-N-{(1S)-4-{[amino(iminio)methyl]amino}-1-[(1S)-2-chloro-1-hydroxyethyl]butyl}glycinamide0GJ
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 1BUI RCSB PDB: 1BUI PDBe: 1BUI UniProt: P00747

Downloads

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