ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5udvF2 - ECOD Domain | ECOD

ECOD/Domains/e5udvF2

e5udvF2

UID: 002326629

PDB

Range: F:2-176
PDB: 5UDV chain F(all domains)
UniProt: F9UST4 (all domains)
Gene: larE

Molecule: Lactate racemization operon protein LarE

3D Structure

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Related Domains

Browse other domains in NAD_synthase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyNAD_synthase(2005.1.1.18)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, Sulfate ion)

Phosphate ionPO4
DrugBank DB14523
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02540NAD_synthase

NAD synthase

ClanCL0039HUP

External Links

ECOD PDB View: 5UDV RCSB PDB: 5UDV PDBe: 5UDV UniProt: F9UST4

Downloads

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