ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m8hD1 - ECOD Domain | ECOD

ECOD/Domains/e5m8hD1

e5m8hD1

UID: 002326730

PDB

Range: D:0-322
PDB: 5M8H chain D(all domains)
UniProt: Q4FTX3 (all domains)
Gene: hisZ

Molecule: ATP phosphoribosyltransferase regulatory subunit

3D Structure

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Related Domains

Browse other domains in tRNA-synt_His →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_His(314.1.1.9)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Strontium ionSR
metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD

Pfam Families

PF13393tRNA-synt_His

Histidyl-tRNA synthetase

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 5M8H RCSB PDB: 5M8H PDBe: 5M8H UniProt: Q4FTX3

Downloads

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DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.