ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5h62A1 - ECOD Domain | ECOD

ECOD/Domains/e5h62A1

e5h62A1

UID: 002326986

PDB

Range: A:40-348
PDB: 5H62 chain A(all domains)
UniProt: Q8ZNP4 (all domains)
Gene: sseK2

Molecule: Transferase

3D Structure

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Related Domains

Browse other domains in SseK_NleB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilySseK_NleB(7516.1.1.90)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
MANGANESE (II) IONMN
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF24688SseK_NleB

SseK/NleB family

ClanCL0110GT-A

External Links

ECOD PDB View: 5H62 RCSB PDB: 5H62 PDBe: 5H62 UniProt: Q8ZNP4

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.