ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yk0A1 - ECOD Domain | ECOD

ECOD/Domains/e5yk0A1

e5yk0A1

UID: 002327099

PDB

Range: A:45-443
PDB: 5YK0 chain A(all domains)
UniProt: O53343 (all domains)
Gene: Rv3197

Molecule: Probable conserved ATP-binding protein ABC transporter

3D Structure

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Related Domains

Browse other domains in ABC1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyABC1(206.1.1.14)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

ABC1 atypical kinase-like domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5YK0 RCSB PDB: 5YK0 PDBe: 5YK0 UniProt: O53343

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.