ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6eytB1 - ECOD Domain | ECOD

ECOD/Domains/e6eytB1

e6eytB1

UID: 002327107

PDB

Range: B:27-335
PDB: 6EYT chain B(all domains)
UniProt: A0A0H3NMP8 (all domains)
Gene: G1W50_07705

Molecule: Type III secretion system effector protein

3D Structure

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Related Domains

Browse other domains in SseK_NleB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilySseK_NleB(7516.1.1.90)

Ligands

in contact, ≤ 4 Å

N-acetyl-alpha-D-glucosamineNDG
drugDrugBank DB03740
Uridine-5'-DiphosphateUDP
drugDrugBank DB03435

Pfam Families

PF24688SseK_NleB

SseK/NleB family

ClanCL0110GT-A

External Links

ECOD PDB View: 6EYT RCSB PDB: 6EYT PDBe: 6EYT UniProt: A0A0H3NMP8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Iodide ionIOD

MANGANESE (II) IONMN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.