ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v12B2 - ECOD Domain | ECOD

ECOD/Domains/e5v12B2

e5v12B2

UID: 002327262

PDB

Range: B:22-327
PDB: 5V12 chain B(all domains)
UniProt: A7UX13 (all domains)
Gene: egt-2

Molecule: Hercynylcysteine sulfoxide lyase

3D Structure

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Related Domains

Browse other domains in Aminotran_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_5(7577.1.1.3)

Ligands

in contact, ≤ 4 Å

(1S)-1-carboxy-2-[2-(hydroxysulfanyl)-1H-imidazol-4-yl]-N,N,N-trimethylethan-1-aminium8QJ

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00266Aminotran_5

Aminotransferase class-V

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 5V12 RCSB PDB: 5V12 PDBe: 5V12 UniProt: A7UX13

Downloads

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