ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o8mB1 - ECOD Domain | ECOD

ECOD/Domains/e5o8mB1

e5o8mB1

UID: 002327483

PDB

Range: B:350-483
PDB: 5O8M chain B(all domains)
UniProt: O74958 (all domains)
Gene: mmi1

Molecule: YTH domain-containing protein mmi1

3D Structure

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Related Domains

Browse other domains in YTH →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyYTH(1.1.9.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

YT521-B-like domain

ClanCL0178PUA

External Links

ECOD PDB View: 5O8M RCSB PDB: 5O8M PDBe: 5O8M UniProt: O74958

Downloads

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