ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1wykD1 - ECOD Domain | ECOD

ECOD/Domains/e1wykD1

e1wykD1

UID: 000023277

PDB

Range: D:113-264
PDB: 1WYK chain D(all domains)
UniProt: P27285 (all domains)

Molecule: SINDBIS VIRUS CAPSID PROTEIN

3D Structure

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Related Domains

Browse other domains in Peptidase_S3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S3(1.1.5.4)

Ligands

in contact, ≤ 4 Å

FormaldehydeFOR
drugDrugBank DB03843

+ 1 additive (1,4-Dioxane)

1,4-DioxaneDIO
DrugBank DB03316

Shown in the structure viewer.

Pfam Families

PF00944Peptidase_S3

Alphavirus core protein

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 1WYK RCSB PDB: 1WYK PDBe: 1WYK UniProt: P27285

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.