ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bplB2 - ECOD Domain | ECOD

ECOD/Domains/e6bplB2

e6bplB2

UID: 002327774

PDB

Range: B:7-328
PDB: 6BPL chain B(all domains)
UniProt: P60753 (all domains)
Gene: msbA

Molecule: Lipid A export ATP-binding/permease protein MsbA

3D Structure

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Related Domains

Browse other domains in ABC_membrane →

Classification

AArchitecturealpha bundles(a.7)

XX-groupType II ABC exporter transmembrane domain fold(1075)

HH-groupType I ABC exporter transmembrane domain fold(1075.4)

TT-groupType I ABC exporter transmembrane domain fold(1075.4.1)

FFamilyABC_membrane(1075.4.1.1)

Ligands

in contact, ≤ 4 Å

Lauric acidDAO
drugDrugBank DB03017
(R)-3-hydroxytetradecanoic acidFTT
drugDrugBank DB02767

Pfam Families

PF00664ABC_membrane

ABC transporter transmembrane region

ClanCL0241ABC_membrane

External Links

ECOD PDB View: 6BPL RCSB PDB: 6BPL PDBe: 6BPL UniProt: P60753

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Myristic acid

drugDrugBank DB08231within 5 Å only

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE

(2E)-3-{6-[(1S)-1-(2-chloro-6-cyclopropylphenyl)ethoxy]-4-cyclopropylquinolin-3-yl}prop-2-enoic acidAU7

2-amino-2-deoxy-alpha-D-glucopyranosePA1

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.