ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vcpB1 - ECOD Domain | ECOD

ECOD/Domains/e1vcpB1

e1vcpB1

UID: 000023279

PDB

Range: B:119-267
PDB: 1VCP chain B(all domains)
UniProt: P03315 (all domains)

Molecule: SEMLIKI FOREST VIRUS CAPSID PROTEIN

3D Structure

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Related Domains

Browse other domains in Peptidase_S3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S3(1.1.5.4)

Ligands

in contact, ≤ 4 Å

MERCURY (II) IONHG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00944Peptidase_S3

Alphavirus core protein

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 1VCP RCSB PDB: 1VCP PDBe: 1VCP UniProt: P03315

Downloads

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