ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o9rA1 - ECOD Domain | ECOD

ECOD/Domains/e5o9rA1

e5o9rA1

UID: 002328535

PDB

Range: A:29-359
PDB: 5O9R chain A(all domains)
UniProt: Q06135 (all domains)
Gene: GAS2

Molecule: 1,3-beta-glucanosyltransferase GAS2

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_72 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_72(2002.1.1.110)

Ligands

in contact, ≤ 4 Å

(2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-3,5-bis(oxidanyl)-6-[4-(thiophen-2-ylmethoxymethyl)-1,2,3-triazol-1-yl]oxan-4-yl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-oxane-3,4,5-triol9PK

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4

Pfam Families

PF03198Glyco_hydro_72

Glucanosyltransferase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5O9R RCSB PDB: 5O9R PDBe: 5O9R UniProt: Q06135

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.