ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vncD2 - ECOD Domain | ECOD

ECOD/Domains/e5vncD2

e5vncD2

UID: 002328628

PDB

Range: D:272-639
PDB: 5VNC chain D(all domains)
UniProt: P27472 (all domains)
Gene: GSY2

Molecule: Glycogen [starch] synthase isoform 2

3D Structure

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Related Domains

Browse other domains in Glycos_transf_1, Glycogen_syn →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlycos_transf_1, Glycogen_syn(7512.1.1.84)

Ligands

in contact, ≤ 4 Å

alpha-D-glucose 6-phosphateG6P
drugDrugBank DB02007
Uridine-5'-DiphosphateUDP
drugDrugBank DB03435

Shown in the structure viewer.

Pfam Families

PF00534Glycos_transf_1

Glycosyl transferases group 1

ClanCL0113GT-B

PF05693Glycogen_syn

Glycogen synthase

ClanCL0113GT-B

External Links

ECOD PDB View: 5VNC RCSB PDB: 5VNC PDBe: 5VNC UniProt: P27472

Downloads

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Drug annotations from DrugDomain.