ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bdoB2 - ECOD Domain | ECOD

ECOD/Domains/e6bdoB2

e6bdoB2

UID: 002329636

PDB

Range: B:3-103,B:254-396
PDB: 6BDO chain B(all domains)
UniProt: F5L3B8 (all domains)
Gene: CathTA2_0279

Molecule: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
2-heptyl-4-hydroxyquinoline N-oxideHQO
drugDrugBank DB07918

Shown in the structure viewer.

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6BDO RCSB PDB: 6BDO PDBe: 6BDO UniProt: F5L3B8

Downloads

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Drug annotations from DrugDomain.