ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5txiA3 - ECOD Domain | ECOD

ECOD/Domains/e5txiA3

e5txiA3

UID: 002330094

PDB

Range: A:71-201
PDB: 5TXI chain A(all domains)
UniProt: Q2G2X6 (all domains)
Gene: SAOUHSC_00646

Molecule: Penicillin binding protein 4

3D Structure

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Related Domains

Browse other domains in Peptidase_S11 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyPeptidase_S11(4019.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(2R)-2-[(1R)-1-{[(2Z)-2-(5-amino-1,2,4-thiadiazol-3-yl)-2-(hydroxyimino)acetyl]amino}-2-oxoethyl]-5-({2-oxo-1-[(3R)-pyrrolidin-3-yl]-2,5-dihydro-1H-pyrrol-3-yl}methyl)-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acidRB6

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

PF00768Peptidase_S11

D-alanyl-D-alanine carboxypeptidase

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 5TXI RCSB PDB: 5TXI PDBe: 5TXI UniProt: Q2G2X6

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.