ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xx1D3 - ECOD Domain | ECOD

ECOD/Domains/e5xx1D3

e5xx1D3

UID: 002330148

PDB

Range: D:139-440
PDB: 5XX1 chain D(all domains)
UniProt: Q8Z1P1 (all domains)
Gene: adi

Molecule: Arginine decarboxylase

3D Structure

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Related Domains

Browse other domains in OKR_DC_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyOKR_DC_1(7577.1.1.9)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01276OKR_DC_1

Orn/Lys/Arg decarboxylase, major domain

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 5XX1 RCSB PDB: 5XX1 PDBe: 5XX1 UniProt: Q8Z1P1

Downloads

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