ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o0iA1 - ECOD Domain | ECOD

ECOD/Domains/e5o0iA1

e5o0iA1

UID: 002330536

PDB

Range: A:4-457
PDB: 5O0I chain A(all domains)
UniProt: O58328 (all domains)
Gene: glkA

Molecule: ADP-dependent glucokinase

3D Structure

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Related Domains

Browse other domains in ADP_PFK_GK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRibokinase-like(2003.6)

TT-groupRibokinase-like(2003.6.1)

FFamilyADP_PFK_GK(2003.6.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Sulfate ion, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PF04587ADP_PFK_GK

ADP-specific Phosphofructokinase/Glucokinase conserved region

ClanCL0118Ribokinase

External Links

ECOD PDB View: 5O0I RCSB PDB: 5O0I PDBe: 5O0I UniProt: O58328

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.