ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6cd0A2 - ECOD Domain | ECOD

ECOD/Domains/e6cd0A2

e6cd0A2

UID: 002331515

PDB

Range: A:82-373
PDB: 6CD0 chain A(all domains)
UniProt: G7ILW0 (all domains)
Gene: 11445860

Molecule: Serine hydroxymethyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilySHMT(7577.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 6CD0 RCSB PDB: 6CD0 PDBe: 6CD0 UniProt: G7ILW0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure