ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cd0C1 - ECOD Domain | ECOD

ECOD/Domains/e6cd0C1

e6cd0C1

UID: 002331520

PDB

Range: C:82-373
PDB: 6CD0 chain C(all domains)
UniProt: G7ILW0 (all domains)
Gene: 11445860

Molecule: Serine hydroxymethyltransferase

3D Structure

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Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilySHMT(7577.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate, Formic acid)

AcetateACT
DrugBank DB14511
Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 6CD0 RCSB PDB: 6CD0 PDBe: 6CD0 UniProt: G7ILW0

Downloads

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