ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6flmB1 - ECOD Domain | ECOD

ECOD/Domains/e6flmB1

e6flmB1

UID: 002332106

PDB

Range: B:432-629
PDB: 6FLM chain B(all domains)
UniProt: Q14258 (all domains)
Gene: TRIM25

Molecule: E3 ubiquitin/ISG15 ligase TRIM25

3D Structure

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Related Domains

Browse other domains in SPRY,PRY →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilySPRY,PRY(10.1.1.9)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SPRY domain

ClanCL0004Concanavalin

SPRY-associated domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 6FLM RCSB PDB: 6FLM PDBe: 6FLM UniProt: Q14258

Downloads

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