ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6flmC1 - ECOD Domain | ECOD

ECOD/Domains/e6flmC1

e6flmC1

UID: 002332107

PDB

Range: C:432-630
PDB: 6FLM chain C(all domains)
UniProt: Q14258 (all domains)
Gene: TRIM25

Molecule: E3 ubiquitin/ISG15 ligase TRIM25

3D Structure

Loading viewer...

Related Domains

Browse other domains in SPRY,PRY →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilySPRY,PRY(10.1.1.9)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SPRY domain

ClanCL0004Concanavalin

SPRY-associated domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 6FLM RCSB PDB: 6FLM PDBe: 6FLM UniProt: Q14258

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure