ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ge0A1 - ECOD Domain | ECOD

ECOD/Domains/e6ge0A1

e6ge0A1

UID: 002332523

PDB

Range: A:11-357
PDB: 6GE0 chain A(all domains)
UniProt: P28482 (all domains)
Gene: MAPK1

Molecule: Mitogen-activated protein kinase 1

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

2-[5-[5-chloranyl-2-(oxan-4-ylamino)pyrimidin-4-yl]-3-oxidanylidene-1~{H}-isoindol-2-yl]-~{N}-[(1~{R})-1-(3-methoxyphenyl)ethyl]ethanamideEVQ

+ 2 additives (Dimethyl sulfoxide, Sulfate ion)

Dimethyl sulfoxideDMS
DrugBank DB01093

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 6GE0 RCSB PDB: 6GE0 PDBe: 6GE0 UniProt: P28482

Downloads

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Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.