ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5n12B1 - ECOD Domain | ECOD

ECOD/Domains/e5n12B1

e5n12B1

UID: 002332596

PDB

Range: B:27-220
PDB: 5N12 chain B(all domains)
UniProt: Q183R7 (all domains)
Gene: zmp1

Molecule: Pro-Pro endopeptidase

3D Structure

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Related Domains

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Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyATLF(2498.1.1.34)

Ligands

in contact, ≤ 4 Å

2,2,2-tris-chloroethanol8FH
Zinc ionZN
metal

+ 1 additive (Tromethamine)

TromethamineTRS

Pfam Families

Anthrax toxin lethal factor, N- and C-terminal domain

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 5N12 RCSB PDB: 5N12 PDBe: 5N12 UniProt: Q183R7

Downloads

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DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.