ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wm6A3 - ECOD Domain | ECOD

ECOD/Domains/e5wm6A3

e5wm6A3

UID: 002332906

PDB

Range: A:198-373
PDB: 5WM6 chain A(all domains)
UniProt: A0A140DJY3 (all domains)
Gene: cahJ

Molecule: Salicylate-AMP ligase

3D Structure

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Related Domains

Browse other domains in AMP-binding →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCoA-dependent acyltransferases(323)

HH-groupCoA-dependent acyltransferases(323.1)

TT-groupCoA-dependent acyltransferases(323.1.1)

FFamilyAMP-binding(323.1.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
5'-O-[(R)-(benzoyloxy)(hydroxy)phosphoryl]adenosineOOB

+ 1 additive (Acetate)

AcetateACT

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

External Links

ECOD PDB View: 5WM6 RCSB PDB: 5WM6 PDBe: 5WM6 UniProt: A0A140DJY3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.