ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yabD2 - ECOD Domain | ECOD

ECOD/Domains/e5yabD2

e5yabD2

UID: 002332960

PDB

Range: D:162-348
PDB: 5YAB chain D(all domains)
UniProt: K7ZP76 (all domains)
Gene: lgdA

Molecule: Scyllo-inositol dehydrogenase with L-glucose dehydrogenase activity

3D Structure

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Related Domains

Browse other domains in GFO_IDH_MocA_C3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyGFO_IDH_MocA_C3(298.1.1.24)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22725GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 5YAB RCSB PDB: 5YAB PDBe: 5YAB UniProt: K7ZP76

Downloads

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