ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6c90A4 - ECOD Domain | ECOD

ECOD/Domains/e6c90A4

e6c90A4

UID: 002335265

PDB

Range: A:90-312
PDB: 6C90 chain A(all domains)
UniProt: P42285 (all domains)
Gene: MTREX

Molecule: Exosome RNA helicase MTR4,Exosome RNA helicase MTR4

3D Structure

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Related Domains

Browse other domains in DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD(2004.1.1.29)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
L-tartaric acidTLA
drugDrugBank DB09459

+ 1 additive (Malonate ion)

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6C90 RCSB PDB: 6C90 PDBe: 6C90 UniProt: P42285

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Malonate ionMLI

Shown in the structure viewer. Drug annotations from DrugDomain.