ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m2xE1 - ECOD Domain | ECOD

ECOD/Domains/e5m2xE1

e5m2xE1

UID: 002336071

PDB

Range: E:703-888
PDB: 5M2X chain E(all domains)
UniProt: A0A0X8GJ44 (all domains)

Molecule: NS5

3D Structure

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Related Domains

Browse other domains in Flavi_NS5_thumb →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyFlavi_NS5_thumb(4967.1.1.14)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20483Flavi_NS5_thumb

Flavivirus RNA-directed RNA polymerase, thumb domain

ClanCL0027RdRP

External Links

ECOD PDB View: 5M2X RCSB PDB: 5M2X PDBe: 5M2X UniProt: A0A0X8GJ44

Downloads

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