ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5z45A1 - ECOD Domain | ECOD

ECOD/Domains/e5z45A1

e5z45A1

UID: 002336996

PDB

Range: A:1-289
PDB: 5Z45 chain A(all domains)
UniProt: V5TDZ4 (all domains)
Gene: ambP1

Molecule: AmbP1

3D Structure

Loading viewer...

Related Domains

Browse other domains in PTase_Orf2 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupPrenyltransferase-like(4194)

HH-groupPrenyltransferase-like(4194.1)

TT-groupPrenyltransferase-like(4194.1.1)

FFamilyPTase_Orf2(4194.1.1.1)

Ligands

in contact, ≤ 4 Å

S-[(2E)-3,7-DIMETHYLOCTA-2,6-DIENYL] TRIHYDROGENTHIODIPHOSPHATEGST
drugDrugBank DB04702
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF11468PTase_Orf2

Aromatic prenyltransferase Orf2

External Links

ECOD PDB View: 5Z45 RCSB PDB: 5Z45 PDBe: 5Z45 UniProt: V5TDZ4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure