ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4j8qA1 - ECOD Domain | ECOD

ECOD/Domains/e4j8qA1

e4j8qA1

UID: 000235359

PDB

Range: A:104-227
PDB: 4J8Q chain A(all domains)
UniProt: Q5LHD5 (all domains)
Gene: BF9343_0666

Molecule: Putative uncharacterized protein

3D Structure

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Related Domains

Browse other domains in NigD_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupIg-like domain in putative lipoprotein BF3042-related proteins(3233)

HH-groupIg-like domain in putative lipoprotein BF3042-related proteins(3233.1)

TT-groupIg-like domain in putative lipoprotein BF3042-related proteins(3233.1.1)

FFamilyNigD_C(3233.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NigD-like C-terminal beta sandwich domain

External Links

ECOD PDB View: 4J8Q RCSB PDB: 4J8Q PDBe: 4J8Q UniProt: Q5LHD5

Downloads

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